STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109114263Uncharacterized protein LOC109114263. (470 aa)    
Predicted Functional Partners:
LOC104594015
Uncharacterized protein LOC104594015.
  
     0.517
LOC104593283
Uncharacterized protein LOC104593283.
  
     0.511
LOC104606351
Uncharacterized protein LOC104606351.
  
     0.488
LOC109114277
Uncharacterized protein LOC109114277.
  
     0.485
LOC104600803
Uncharacterized protein LOC104600803.
 
     0.484
LOC109114106
Uncharacterized protein LOC109114106.
  
     0.481
LOC104589245
Uncharacterized protein LOC104589245.
  
     0.478
LOC104605169
Uncharacterized protein LOC104605169.
  
     0.476
LOC109114559
Uncharacterized protein LOC109114559.
  
     0.475
LOC109115707
Uncharacterized protein LOC109115707.
  
     0.475
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.