STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104600821Serine/threonine-protein kinase BLUS1-like. (589 aa)    
Predicted Functional Partners:
LOC104600226
dnaJ protein ERDJ2A.
    
 
 0.753
LOC104597406
Translocation protein sec62-like.
    
 
 0.676
LOC104612993
Uncharacterized protein LOC104612993.
    
 
 0.676
LOC104591739
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.639
LOC104592878
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.639
LOC104610186
Protein transport protein Sec61 subunit gamma.
   
 
 0.639
LOC104586563
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
    
 
 0.426
LOC104591391
Protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family.
    
 
 0.426
LOC104613143
Protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family.
    
 
 0.426
LOC104594817
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.402
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.