STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109115681Uncharacterized protein LOC109115681. (346 aa)    
Predicted Functional Partners:
LOC109115749
Uncharacterized protein LOC109115749.
  
     0.523
LOC109114085
Uncharacterized protein LOC109114085.
  
     0.506
LOC109115353
Uncharacterized protein LOC109115353.
 
     0.498
LOC109114020
Uncharacterized protein LOC109114020.
  
     0.497
LOC109114747
Uncharacterized protein LOC109114747.
  
     0.495
LOC109115726
Uncharacterized protein LOC109115726.
  
     0.491
LOC109115244
Uncharacterized protein LOC109115244.
  
     0.488
LOC109115746
Uncharacterized protein LOC109115746.
  
     0.480
LOC109114377
Uncharacterized protein LOC109114377.
  
     0.479
LOC109115586
Uncharacterized protein LOC109115586.
  
     0.476
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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