STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104611888BEACH domain-containing protein C2 isoform X1. (2972 aa)    
Predicted Functional Partners:
LOC104604912
Uncharacterized protein LOC104604912 isoform X1.
  
  
 0.511
LOC104585692
Uncharacterized protein LOC104585692 isoform X1.
  
  
 0.508
LOC104594586
Uncharacterized protein LOC104594586 isoform X1.
  
     0.495
LOC104599678
Protein NAP1.
  
  
  0.473
LOC104598155
Thyroid adenoma-associated protein homolog.
  
     0.465
LOC104602997
HEAT repeat-containing protein 5B.
  
  
 0.463
LOC104606481
Protein SPIRRIG-like isoform X1.
  
  
0.443
LOC104610354
Protein SPIRRIG-like isoform X1.
  
  
0.442
LOC104589384
Serine/threonine-protein kinase TIO.
  
   
 0.438
LOC104603839
Myosin heavy chain, skeletal muscle.
  
  
  0.429
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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