STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109115814Uncharacterized protein LOC109115814. (151 aa)    
Predicted Functional Partners:
LOC109115932
Uncharacterized protein LOC109115932.
  
     0.522
LOC109113940
Uncharacterized protein LOC109113940.
  
     0.517
LOC109114919
Uncharacterized protein LOC109114919.
  
     0.516
LOC104608783
Uncharacterized protein LOC104608783.
  
     0.511
LOC109115091
Uncharacterized protein LOC109115091.
  
     0.509
LOC109115797
Uncharacterized protein LOC109115797.
  
     0.508
LOC109114299
Uncharacterized protein LOC109114299.
  
     0.506
LOC109115066
Uncharacterized protein LOC109115066.
  
     0.500
LOC109113931
Uncharacterized protein LOC109113931.
  
     0.499
LOC109115186
Uncharacterized protein LOC109115186.
  
     0.498
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.