STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps230S ribosomal protein S2, chloroplastic. (236 aa)    
Predicted Functional Partners:
LOC104605419
Uncharacterized protein LOC104605419.
  
 0.999
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.999
LOC104607239
Uncharacterized protein LOC104607239; Belongs to the universal ribosomal protein uS5 family.
  
 0.998
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 0.998
LOC104610663
28S ribosomal protein S29, mitochondrial isoform X1.
   
 0.997
LOC104598979
40S ribosomal protein S21-2-like isoform X1.
   
 0.992
LOC104597654
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.991
LOC104607605
40S ribosomal protein S5-like; Belongs to the universal ribosomal protein uS7 family.
  
 0.991
LOC104611130
40S ribosomal protein S5-like; Belongs to the universal ribosomal protein uS7 family.
  
 0.991
LOC104588281
30S ribosomal protein S16-2, chloroplastic/mitochondrial-like.
  
 0.989
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.