STRINGSTRING
XP_010240802.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240802.1" - Uncharacterized protein LOC104585572 in Nelumbo nucifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240802.1Uncharacterized protein LOC104585572 (70 aa)    
Predicted Functional Partners:
XP_010265878.1
Uncharacterized protein LOC104603523 (191 aa)
           
  0.843
XP_010272436.1
Uncharacterized protein LOC104608217 (309 aa)
           
  0.623
XP_010260212.1
Uncharacterized protein LOC104599397; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (309 aa)
           
  0.623
XP_010271606.1
NAC domain-containing protein 90-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (248 aa)
           
  0.481
XP_010271600.1
NAC domain-containing protein 90-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (318 aa)
           
  0.481
XP_010245803.1
NAC domain-containing protein 90-like (263 aa)
           
  0.481
XP_010245796.1
NAC domain-containing protein 90-like (248 aa)
           
  0.481
XP_010277132.1
Probable protein phosphatase 2C 63 (376 aa)
           
  0.465
XP_010271837.1
Probable protein phosphatase 2C 63 (373 aa)
           
  0.465
XP_010247442.1
Uncharacterized protein LOC104590465; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (300 aa)
           
  0.418
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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