STRINGSTRING
XP_010240805.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240805.1" - Chromatin structure-remodeling complex protein BSH in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
XP_010240805.1Chromatin structure-remodeling complex protein BSH (240 aa)    
Predicted Functional Partners:
XP_010260462.1
Actin-related protein 4; Belongs to the actin family (445 aa)
     
 
  0.991
XP_010250752.1
SWI/SNF complex component SNF12 homolog (548 aa)
     
 
  0.957
XP_010244613.1
SWI/SNF complex component SNF12 homolog (546 aa)
     
 
  0.957
XP_010247116.1
Chromatin structure-remodeling complex protein SYD isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (4105 aa)
     
 
  0.952
XP_010274194.1
Putative high mobility group B protein 11 (455 aa)
     
 
  0.932
XP_010274034.1
High mobility group B protein 15-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (442 aa)
     
 
  0.932
XP_010266928.1
High mobility group B protein 9-like isoform X1 (338 aa)
     
 
  0.932
XP_010266072.1
High mobility group B protein 9-like (346 aa)
     
 
  0.932
XP_010252902.1
High mobility group B protein 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (333 aa)
     
 
  0.932
XP_010241376.1
High mobility group B protein 15-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (674 aa)
     
 
  0.932
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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