STRINGSTRING
XP_010240821.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240821.1" - Transcription factor HY5-like in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240821.1Transcription factor HY5-like (155 aa)    
Predicted Functional Partners:
XP_010270052.1
E3 ubiquitin-protein ligase COP1-like (687 aa)
     
  0.971
XP_010252572.1
E3 ubiquitin-protein ligase COP1 (685 aa)
     
  0.971
XP_010250037.1
Transcription factor HY5 (170 aa)
     
0.962
XP_010254358.1
Transcription factor HY5-like (172 aa)
     
0.962
XP_010246312.1
Light-mediated development protein DET1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (535 aa)
       
 
  0.922
XP_010272766.1
Probable E3 ubiquitin-protein ligase HERC4 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (418 aa)
           
  0.842
XP_010260757.1
Probable E3 ubiquitin-protein ligase HERC2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (464 aa)
           
  0.842
XP_010241665.1
ultraviolet-B receptor UVR8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (453 aa)
           
  0.842
XP_010255201.1
G-box-binding factor 1 (498 aa)
       
 
  0.837
XP_010244321.1
G-box-binding factor 1-like isoform X1 (420 aa)
       
 
  0.837
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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