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XP_010240825.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240825.1" - Pectin acetylesterase in Nelumbo nucifera
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
XP_010240825.1Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (410 aa)    
Predicted Functional Partners:
XP_010243477.1
Uncharacterized protein LOC104587528 (323 aa)
           
  0.550
XP_010273412.1
Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (676 aa)
           
  0.536
XP_010266696.1
pre-mRNA-splicing factor SPF27 homolog (251 aa)
       
      0.493
XP_010253098.1
expansin-A8-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (254 aa)
     
   
  0.453
XP_010252076.1
expansin-A8-like (253 aa)
     
   
  0.453
XP_010251689.1
Protein argonaute 4A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns; Belongs to the argonaute family (921 aa)
           
  0.444
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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