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XP_010240869.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240869.1" - E3 ubiquitin-protein ligase Os04g0590900 in Nelumbo nucifera
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_010240869.1E3 ubiquitin-protein ligase Os04g0590900 (373 aa)    
Predicted Functional Partners:
XP_010253060.1
Pentatricopeptide repeat-containing protein At2g40720; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (870 aa)
           
  0.760
XP_010271160.1
25.3 kDa vesicle transport protein-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the synaptobrevin family (218 aa)
           
  0.623
XP_010245740.1
25.3 kDa vesicle transport protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns; Belongs to the synaptobrevin family (218 aa)
           
  0.623
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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