STRINGSTRING
XP_010240880.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240880.1" - Uncharacterized protein LOC104585632 in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
XP_010240880.1Uncharacterized protein LOC104585632; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (471 aa)    
Predicted Functional Partners:
XP_010259027.1
Thylakoid lumenal protein At1g12250, chloroplastic (267 aa)
   
        0.868
XP_010247595.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (543 aa)
   
 
  0.830
XP_010268032.1
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (485 aa)
   
 
  0.817
XP_010253338.1
Adenosylhomocysteinase (485 aa)
   
 
  0.817
XP_010247578.1
Adenosylhomocysteinase (485 aa)
   
 
  0.817
XP_010265228.1
Mediator of RNA polymerase II transcription subunit 25 (809 aa)
       
      0.789
XP_010257314.1
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family (490 aa)
   
 
  0.761
XP_010247193.1
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP (499 aa)
   
 
  0.761
XP_010242031.1
Uncharacterized protein LOC104586479 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (294 aa)
   
        0.748
XP_010261165.1
Pentatricopeptide repeat-containing protein At4g18520-like (613 aa)
           
  0.738
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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