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XP_010240898.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240898.1" - ABC transporter B family member 2-like in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
XP_010240898.1ABC transporter B family member 2-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (1246 aa)    
Predicted Functional Partners:
XP_010247424.1
CTD small phosphatase-like protein 2-A isoform X1 (485 aa)
     
   
  0.698
XP_010241492.1
Vesicular GABA transporter (481 aa)
           
  0.696
XP_010274069.1
Putative bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 (458 aa)
   
   
  0.642
XP_010254749.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (578 aa)
   
   
  0.642
XP_010267940.1
Peroxidase 40; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (343 aa)
           
  0.625
XP_010273797.1
RING-H2 finger protein ATL3 (300 aa)
           
  0.621
XP_010272967.1
E3 ubiquitin-protein ligase ATL6-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (389 aa)
           
  0.621
XP_010266641.1
E3 ubiquitin-protein ligase ATL6-like (425 aa)
           
  0.621
XP_010265649.1
Pentatricopeptide repeat-containing protein At1g79490, mitochondrial (845 aa)
           
  0.614
XP_010268715.1
CDPK-related kinase 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (609 aa)
       
 
  0.541
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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