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XP_010240925.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240925.1" - tyrosyl-DNA phosphodiesterase 1 isoform X1 in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240925.1tyrosyl-DNA phosphodiesterase 1 isoform X1 (660 aa)    
Predicted Functional Partners:
XP_010253809.1
Transcription factor bHLH140 isoform X1 (757 aa)
     
 
  0.979
XP_010277929.1
Double-strand break repair protein MRE11 isoform X1; Belongs to the MRE11/RAD32 family (726 aa)
     
 
  0.946
XP_010273300.1
Crossover junction endonuclease MUS81 isoform X1 (654 aa)
     
 
  0.857
XP_010251581.1
Polynucleotide 3’-phosphatase ZDP isoform X1 (416 aa)
     
 
  0.855
XP_010252437.1
DNA excision repair protein ERCC-1 (414 aa)
       
 
  0.839
XP_010250226.1
formamidopyrimidine-DNA glycosylase isoform X1 (387 aa)
     
   
  0.832
XP_010266803.1
DNA topoisomerase 1 alpha-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (890 aa)
     
 
  0.819
XP_010252639.1
DNA topoisomerase 1-like (883 aa)
     
 
  0.819
XP_010249777.1
Regulator of telomere elongation helicase 1 homolog isoform X1 (1045 aa)
     
   
  0.803
XP_010273583.1
DNA ligase 4 isoform X1 (1168 aa)
     
 
  0.793
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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