STRINGSTRING
XP_010240945.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240945.1" - Protein NDR1-like in Nelumbo nucifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240945.1Protein NDR1-like (207 aa)    
Predicted Functional Partners:
XP_010274042.1
RPM1-interacting protein 4-like (262 aa)
       
 
  0.630
XP_010247236.1
RPM1-interacting protein 4-like (255 aa)
       
 
  0.630
XP_010252372.1
Cleft lip and palate transmembrane protein 1 homolog (589 aa)
           
  0.599
XP_010275473.1
Bax inhibitor 1; Belongs to the BI1 family (249 aa)
           
  0.534
XP_010258747.1
Bax inhibitor 1-like; Belongs to the BI1 family (249 aa)
           
  0.534
XP_010272112.1
Protein EDS1L-like; Lipase-like PAD4 (626 aa)
           
  0.516
XP_010241293.1
Protein EDS1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (623 aa)
           
  0.516
XP_010277444.1
Cysteine and histidine-rich domain-containing protein RAR1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (224 aa)
           
  0.483
XP_010248776.1
Protein YLS9-like (247 aa)
           
  0.445
XP_010246772.1
Protein YLS9-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (249 aa)
           
  0.445
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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