STRINGSTRING
XP_010240959.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240959.1" - cyclin-U1-1 in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240959.1cyclin-U1-1 (227 aa)    
Predicted Functional Partners:
XP_010266291.1
Cell division control protein 2 homolog D; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (314 aa)
       
 
  0.860
XP_010248279.1
Cell division control protein 2 homolog isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns; Belongs to the protein kinase superfamily (316 aa)
       
 
  0.810
XP_010246016.1
Cell division control protein 2 homolog; Belongs to the protein kinase superfamily (294 aa)
       
 
  0.810
XP_010244645.1
cyclin-L1-1-like; Belongs to the cyclin family (450 aa)
     
   
  0.547
XP_010271132.1
cyclin-H1-1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the cyclin family (337 aa)
           
  0.536
XP_010272426.1
Dihydroorotase, mitochondrial-like (347 aa)
           
  0.535
XP_010260216.1
Dihydroorotase, mitochondrial-like isoform X1 (378 aa)
           
  0.535
XP_010269608.1
Cytochrome c1-2, heme protein, mitochondrial-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (390 aa)
           
  0.531
XP_010259469.1
Cytochrome c1-2, heme protein, mitochondrial (310 aa)
           
  0.531
XP_010248637.1
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (583 aa)
     
   
  0.519
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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