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XP_010240988.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240988.1" - Receptor-like serine/threonine-protein kinase SD1-8 in Nelumbo nucifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240988.1Receptor-like serine/threonine-protein kinase SD1-8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (867 aa)    
Predicted Functional Partners:
XP_010244458.1
Uncharacterized protein LOC104588288 (308 aa)
           
  0.648
XP_010246195.1
Putative pentatricopeptide repeat-containing protein At5g37570 (561 aa)
           
  0.639
XP_010277826.1
Uncharacterized protein At4g26450-like isoform X1 (865 aa)
           
  0.630
XP_010261910.1
Auxin-binding protein ABP19a-like (207 aa)
           
  0.630
XP_010261909.1
Auxin-binding protein ABP20-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (207 aa)
           
  0.630
XP_010251423.1
Uncharacterized protein At4g26450-like isoform X1 (899 aa)
           
  0.630
XP_010273869.1
Protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 (357 aa)
           
  0.629
XP_010261772.1
Protein FLUORESCENT IN BLUE LIGHT, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (369 aa)
           
  0.629
XP_010247754.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 8-like (366 aa)
       
 
  0.621
XP_010240991.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 8-like (366 aa)
       
 
  0.621
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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