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XP_010240991.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240991.1" - RING-type E3 ubiquitin transferase in Nelumbo nucifera
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
XP_010240991.1RING-type E3 ubiquitin transferase; U-box domain-containing protein 8-like (366 aa)    
Predicted Functional Partners:
XP_010277904.1
Lysine-specific demethylase JMJ25-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (1182 aa)
     
   
  0.821
XP_010267748.1
Pentatricopeptide repeat-containing protein At4g21170 isoform X1 (414 aa)
           
  0.730
XP_010272983.1
Protein SCAI homolog (602 aa)
           
  0.697
XP_010267613.1
Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (951 aa)
           
  0.697
XP_010266981.1
Protein SCAI-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (602 aa)
           
  0.697
XP_010278342.1
Acanthoscurrin-1-like; Glycine-rich cell wall structural protein-like (162 aa)
           
  0.696
XP_010268788.1
Holotricin-3; Glycine-rich cell wall structural protein 1.0 (158 aa)
           
  0.696
XP_010268934.1
Receptor-like serine/threonine-protein kinase SD1-8 (855 aa)
       
 
  0.621
XP_010240988.1
Receptor-like serine/threonine-protein kinase SD1-8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (867 aa)
       
 
  0.621
XP_010266674.1
Uncharacterized protein LOC104604135 (172 aa)
           
  0.608
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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