STRINGSTRING
XP_010240994.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010240994.1" - Transcription factor bHLH123-like in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010240994.1Transcription factor bHLH123-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (463 aa)    
Predicted Functional Partners:
XP_010277904.1
Lysine-specific demethylase JMJ25-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (1182 aa)
           
  0.672
XP_010247754.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 8-like (366 aa)
           
  0.601
XP_010240991.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 8-like (366 aa)
           
  0.601
XP_010248377.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 17-like (712 aa)
           
  0.542
XP_010242129.1
RING-type E3 ubiquitin transferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (717 aa)
           
  0.542
XP_010266424.1
Uncharacterized protein LOC104603944 isoform X1 (634 aa)
           
  0.538
XP_010268956.1
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 (985 aa)
           
  0.475
XP_010268933.1
G-type lectin S-receptor-like serine/threonine-protein kinase B120 (851 aa)
           
  0.475
XP_010268928.1
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 (852 aa)
           
  0.475
XP_010268927.1
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 (846 aa)
           
  0.475
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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