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XP_010241001.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010241001.1" - (-)-germacrene D synthase-like in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010241001.1(-)-germacrene D synthase-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (564 aa)    
Predicted Functional Partners:
XP_010263865.1
Squalene synthase-like (415 aa)
         
  0.949
XP_010248191.1
(3S,6E)-nerolidol synthase 1-like (609 aa)
     
 
0.910
XP_010242996.1
Protein farnesyltransferase subunit beta isoform X1 (448 aa)
         
    0.800
XP_010242749.1
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (332 aa)
         
    0.800
XP_010276119.1
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like; Belongs to the FPP/GGPP synthase family (320 aa)
         
  0.774
XP_010266070.1
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns; Belongs to the FPP/GGPP synthase family (342 aa)
         
  0.656
XP_010264689.1
Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like; Belongs to the FPP/GGPP synthase family (363 aa)
         
  0.656
XP_010254951.1
Geranylgeranyl pyrophosphate synthase, chloroplastic-like; Belongs to the FPP/GGPP synthase family (366 aa)
         
  0.656
XP_010244223.1
Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like (246 aa)
         
  0.656
XP_010266352.1
Alkyl transferase; Dehydrodolichyl diphosphate synthase 6-like; Belongs to the UPP synthase family (331 aa)
         
  0.622
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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