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XP_010241028.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010241028.1" - Protein HEAT-STRESS-ASSOCIATED 32 in Nelumbo nucifera
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010241028.1Protein HEAT-STRESS-ASSOCIATED 32; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (286 aa)    
Predicted Functional Partners:
XP_010252437.1
DNA excision repair protein ERCC-1 (414 aa)
           
  0.758
XP_010250269.1
Codeine O-demethylase; Belongs to the iron/ascorbate-dependent oxidoreductase family (365 aa)
           
  0.758
XP_010261402.1
Heat shock protein 83-like (793 aa)
     
   
  0.696
XP_010257890.1
Heat shock protein 81-1-like (794 aa)
     
   
  0.696
XP_010267642.1
Uncharacterized protein LOC104604799 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (286 aa)
           
  0.693
XP_010266521.1
Uncharacterized protein LOC104604011 (282 aa)
           
  0.693
XP_010257526.1
LOW QUALITY PROTEIN- ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 2 bases in 1 codon; Belongs to the AAA ATPase family (675 aa)
           
  0.693
XP_010267811.1
Beta-amylase; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (519 aa)
           
  0.691
XP_010247031.1
Beta-amylase-like (432 aa)
           
  0.691
XP_010241541.1
Actin-related protein 6 isoform X1; Belongs to the actin family (430 aa)
           
  0.675
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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