STRINGSTRING
XP_010241470.1 protein (Nelumbo nucifera) - STRING interaction network
"XP_010241470.1" - Probable nucleolar protein 5-2 isoform X1 in Nelumbo nucifera
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010241470.1Probable nucleolar protein 5-2 isoform X1 (584 aa)    
Predicted Functional Partners:
XP_010240890.1
Transducin beta-like protein 3 (886 aa)
     
 
  0.996
XP_010248525.1
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA (558 aa)
     
 
  0.996
XP_010256456.1
U3 snoRNP-associated protein-like EMB2271; U3 small nucleolar RNA-interacting protein 2-like (516 aa)
     
 
  0.995
XP_010250001.1
Periodic tryptophan protein 2 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (896 aa)
     
 
  0.995
XP_010254815.1
Nucleolar protein 6 isoform X1 (1065 aa)
     
 
  0.995
XP_010262358.1
Ribosomal RNA small subunit methyltransferase nep-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (296 aa)
   
 
  0.995
XP_010257952.1
Nucleolar protein 14 (947 aa)
     
 
  0.995
XP_010249467.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1032 aa)
     
 
  0.994
XP_010275397.1
Uncharacterized protein At3g06530 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (2175 aa)
     
 
  0.994
XP_010242134.1
Ribosome biogenesis protein BMS1 homolog (1225 aa)
     
 
  0.994
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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