STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_0462ABC drug resistance transporter, transmembrane protein. (276 aa)    
Predicted Functional Partners:
AS9A_0461
Putative ABC transporter permease protein.
 
0.987
AS9A_0463
Putative ABC transporter ATP-binding protein.
 
  
 0.963
AS9A_0804
ABC-2 type transporter.
 
 
 0.940
AS9A_3066
Antibiotic resistance ABC superfamily ATP binding cassette transporter, ABC protein.
 
  
 0.843
AS9A_0803
Putative ABC transporter ATP-binding protein.
 
  
 0.839
AS9A_0814
Daunorubicin resistance ABC superfamily ATP binding cassette transporter, ATP-binding protein.
 
  
 0.839
AS9A_4345
Putative ABC transporter ATP-binding protein.
 
  
 0.839
AS9A_0815
ABC-2 type transporter.
 
 
0.820
AS9A_3065
Putative ABC transporter permease protein.
 
 
0.819
AS9A_4246
ABC-type transport system, permease protein.
 
  
  0.799
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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