STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaJ23-oxoacid Co-A transferase beta subunit. (218 aa)    
Predicted Functional Partners:
AS9A_2768
Putative succinyl-CoA--3-ketoacid CoA-transferase alpha subunit.
 0.999
AS9A_0957
Coenzyme A transferase.
 
 
 0.964
fadB
Fatty oxidation complex alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.948
fadB2
Fatty oxidation complex alpha subunit.
  
 0.948
AS9A_0708
Pyruvate carboxyltransferase.
 
 
 0.938
AS9A_0606
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.918
AS9A_4312
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.918
AS9A_2277
Acetoacetate decarboxylase.
    
 0.911
AS9A_4348
Putative acyl-CoA synthetase.
  
 
 0.911
AS9A_4001
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.852
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.