STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_2900Hypothetical protein. (252 aa)    
Predicted Functional Partners:
AS9A_2901
Hypothetical protein.
       0.773
AS9A_3722
Hypothetical protein.
 
     0.755
AS9A_3617
Hypothetical protein.
 
     0.730
AS9A_4129
Hypothetical protein.
 
     0.711
AS9A_2903
Methyltransferase type 11.
       0.533
AS9A_4204
Hypothetical protein.
 
     0.519
AS9A_2112
Hypothetical protein.
 
     0.488
AS9A_2899
Hypothetical protein.
       0.475
AS9A_0038
Glutamate synthase large subunit.
  
    0.452
AS9A_1460
Ferredoxin-dependent glutamate synthase 1.
  
    0.452
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.