STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS9A_3947Putative ABC transporter ATP-binding subunit. (303 aa)    
Predicted Functional Partners:
AS9A_3946
Putative exporter of polyketide antibiotics-like protein.
  
 0.970
AS9A_3041
Hypothetical protein.
  
 0.872
AS9A_3414
BH1004 protein.
  
 0.872
AS9A_3549
Hypothetical protein.
  
 0.872
AS9A_3897
Putative ABC transporter ATP-binding protein.
     
0.804
AS9A_3948
Spore coat protein (Outer).
  
  
 0.754
AS9A_3603
Putative ABC transporter efflux protein, DrrB family.
 
  
 0.615
AS9A_3949
Hypothetical protein.
       0.518
AS9A_3003
Putative ABC transporter permease/ATP-binding protein.
 
 0.501
AS9A_3002
Bifunctional ABC lipid A exporter.
 
0.465
Your Current Organism:
Hoyosella subflava
NCBI taxonomy Id: 443218
Other names: Amycolicicoccus subflavus DQS3-9A1, H. subflava DQS3-9A1, Hoyosella subflava DQS3-9A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.