STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmB1Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (201 aa)    
Predicted Functional Partners:
Tneu_1283
KEGG: pis:Pisl_1835 hypothetical protein.
   
 0.924
psmB2
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
  
 
0.907
psmA
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
0.905
rpl40e
PFAM: Ribosomal protein L40e; KEGG: pis:Pisl_0479 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.855
rps17e
KEGG: pai:PAE0804 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
   0.790
Tneu_0051
KEGG: pis:Pisl_1096 peptidylprolyl isomerase, FKBP-type.
 
     0.790
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.737
Tneu_1879
PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: pis:Pisl_1412 peptidase S1 and S6, chymotrypsin/Hap.
    
 0.651
Tneu_1525
TIGRFAM: thermosome; PFAM: chaperonin Cpn60/TCP-1; KEGG: pis:Pisl_0501 thermosome.
 
 
 0.623
Tneu_1323
TIGRFAM: thermosome; PFAM: chaperonin Cpn60/TCP-1; KEGG: pis:Pisl_0958 thermosome.
 
 
 0.621
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.