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endA protein (Pyrobaculum neutrophilum) - STRING interaction network
"endA" - tRNA-splicing endonuclease in Pyrobaculum neutrophilum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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endAtRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’- and 3’-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (183 aa)    
Predicted Functional Partners:
Tneu_1434
KEGG- pis-Pisl_0894 hypothetical protein (116 aa)
              0.918
Tneu_1433
TIGRFAM- glycyl-tRNA synthetase; PFAM- tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG- pis-Pisl_0895 glycyl-tRNA synthetase (583 aa)
              0.904
Tneu_1842
PFAM- homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG- pis-Pisl_0271 homoserine dehydrogenase (303 aa)
           
  0.888
trpS
Tryptophan--tRNA ligase; KEGG- pis-Pisl_0454 tryptophanyl-tRNA synthetase; TIGRFAM- tryptophanyl-tRNA synthetase; PFAM- aminoacyl-tRNA synthetase class Ib (377 aa)
 
     
  0.826
Tneu_0037
KEGG- pis-Pisl_1079 hypothetical protein (97 aa)
       
 
  0.800
Tneu_1431
PFAM- Arginase/agmatinase/formiminoglutamase; KEGG- pis-Pisl_0897 putative agmatinase; Belongs to the arginase family (268 aa)
              0.794
Tneu_1436
KEGG- pis-Pisl_0892 hypothetical protein (206 aa)
              0.786
Tneu_0071
KEGG- pis-Pisl_1118 hypothetical protein (111 aa)
              0.666
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA; Belongs to the RNase Z family (287 aa)
     
   
  0.660
Tneu_0825
TIGRFAM- ornithine carbamoyltransferase; PFAM- aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG- pcl-Pcal_1594 ornithine carbamoyltransferase; Belongs to the ATCase/OTCase family (306 aa)
           
  0.650
Your Current Organism:
Pyrobaculum neutrophilum
NCBI taxonomy Id: 444157
Other names: P. neutrophilum V24Sta, Pyrobaculum neutrophilum, Pyrobaculum neutrophilum JCM 9278, Pyrobaculum neutrophilum V24Sta, Pyrobaculum neutrophilum str. V24Sta, Pyrobaculum neutrophilum strain V24Sta, Thermoproteus neutrophilus V24Sta
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