STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfnBProtein of unknown function DUF556; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). (236 aa)    
Predicted Functional Partners:
ABX02087.1
PFAM: aspartate/glutamate/uridylate kinase; KEGG: mvn:Mevan_0710 aspartate/glutamate/uridylate kinase.
 
   
 0.937
ABX01904.1
TIGRFAM: dihydropteroate synthase-related protein; PFAM: dihydropteroate synthase DHPS; KEGG: mvn:Mevan_0892 dihydropteroate synthase-related protein.
 
   
 0.923
ABX01691.1
TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: mvn:Mevan_1085 hydantoinase/oxoprolinase.
 
   
 0.913
ABX01150.1
PFAM: protein of unknown function DUF201; KEGG: mvn:Mevan_1440 protein of unknown function DUF201.
 
   
 0.904
ABX01557.1
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mvn:Mevan_1228 triphosphoribosyl-dephospho-CoA protein.
 
   
 0.826
ABX01796.1
TIGRFAM: hisA/hisF family protein; PFAM: histidine biosynthesis protein; KEGG: mvn:Mevan_0992 HisA/HisF family protein; Belongs to the HisA/HisF family.
 
   
 0.818
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
     0.806
ABX02238.1
TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mvn:Mevan_0562 amidohydrolase 3.
 
   
 0.799
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
 
     0.799
ABX01203.1
TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mvn:Mevan_1662 amidohydrolase 3.
 
   
 0.798
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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