STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (289 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
 
 0.996
ABX01139.1
TIGRFAM: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, subunit C; KEGG: mvn:Mevan_1448 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase, subunit C, putative.
  
  
 0.995
rps17e
KEGG: mvn:Mevan_1450 30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.
  
    0.994
ABX01136.1
TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: mvn:Mevan_1451 chorismate mutase.
  
  
 0.993
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.987
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 0.968
ABX01784.1
PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: mvn:Mevan_1004 homoserine dehydrogenase.
 
 
 0.965
ABX01140.1
KEGG: mae:Maeo_0906 hypothetical protein.
  
    0.928
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15 domain protein; KEGG: mvn:Mevan_0891 ribosomal S13S15-like protein.
  
  
 0.908
cmk
TIGRFAM: cytidylate kinase; KEGG: mvn:Mevan_1499 cytidylate kinase, putative.
  
    0.887
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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