STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl15ePFAM: Ribosomal protein L15e; KEGG: mvn:Mevan_1309 ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. (194 aa)    
Predicted Functional Partners:
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA.
   
 0.999
rpl37ae
TIGRFAM: ribosomal protein L37a; PFAM: Ribosomal L37ae protein; KEGG: mvn:Mevan_1262 ribosomal protein L37a.
 
 
 0.999
rpl21e
PFAM: Ribosomal protein L21e; KEGG: mvn:Mevan_1105 ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
 
 0.999
rpl31e
PFAM: Ribosomal protein L31e; KEGG: mvn:Mevan_1077 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
 
 0.999
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15 domain protein; KEGG: mvn:Mevan_0891 ribosomal S13S15-like protein.
 
 
 0.999
rpl3
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
 
 0.999
rpl18
Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
 
 0.999
rpl19e
Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 0.999
rpl32e
PFAM: Ribosomal protein L32e; KEGG: mvn:Mevan_0727 ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.
  
 0.999
rps4e
PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E domain protein; Ribosomal protein S4E, central domain protein; KEGG: mvn:Mevan_0722 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family.
 
 
 0.999
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.