STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl37eRibosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (64 aa)    
Predicted Functional Partners:
rpl22
Ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
 
 0.998
rpl30e
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mvn:Mevan_0675 ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family.
 
 0.998
rpl14e
KOW motif; KEGG: mvn:Mevan_1498 KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family.
 
 0.997
rpl29
PFAM: ribosomal protein L29; KEGG: mvn:Mevan_0716 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
 0.997
rps24e
PFAM: Ribosomal protein S24e; KEGG: mvn:Mevan_1428 ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.994
rps6e
PFAM: Ribosomal protein S6e; KEGG: mvn:Mevan_0522 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.994
rpl31e
PFAM: Ribosomal protein L31e; KEGG: mvn:Mevan_1077 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 0.993
rpl34e
PFAM: Ribosomal protein L34e; KEGG: mvn:Mevan_1500 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.
 
 0.992
rps10
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
 0.991
eIF5A
Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
   
   0.991
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.