STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribLCytidyltransferase-related domain protein; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (150 aa)    
Predicted Functional Partners:
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
  
 0.976
ABX02528.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily (subfamily IA) hydrolase, TIGR02253; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mvn:Mevan_0250 HAD superfamily (subfamily IA) hydrolase, TIGR02253.
 
  
 0.825
ABX02526.1
PFAM: PUA domain containing protein; phosphoadenosine phosphosulfate reductase; KEGG: mvn:Mevan_0248 phosphoadenosine phosphosulfate reductase.
 
     0.797
ABX02525.1
PFAM: protein of unknown function DUF81; KEGG: mvn:Mevan_0247 protein of unknown function DUF81.
  
    0.784
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
  
  
 0.777
ABX02527.1
KEGG: mvn:Mevan_0249 hypothetical protein.
       0.748
ABX02523.1
PFAM: protein of unknown function UPF0118; KEGG: mvn:Mevan_0245 protein of unknown function UPF0118.
       0.730
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
     
 0.700
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.691
ABX01650.1
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: mvn:Mevan_1124 biotin--acetyl-CoA-carboxylase ligase.
 
   
 0.684
Your Current Organism:
Methanococcus maripaludis C6
NCBI taxonomy Id: 444158
Other names: M. maripaludis C6, Methanococcus maripaludis str. C6, Methanococcus maripaludis strain C6
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