STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0927PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: dar:Daro_3360 protein phosphatase 2C-like. (273 aa)    
Predicted Functional Partners:
Emin_0928
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: cbe:Cbei_1929 protein kinase.
 
 0.974
Emin_1309
PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tte:TTE1500 serine/threonine protein kinase.
 
 0.919
Emin_0744
PFAM: PASTA domain containing protein; KEGG: lin:lin1934 similar to putative serine/threonine-specific protein kinase.
 
 
 0.812
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.785
Emin_1354
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: fno:Fnod_0976 glycine cleavage system T protein.
   
 0.769
Emin_0809
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mbn:Mboo_0011 MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.710
Emin_0791
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: dvl:Dvul_1288 chaperone DnaJ domain protein.
  
   0.510
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
   0.510
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.491
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
  
 
 0.489
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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