STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS71506.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
EDS71890.1
KEGG: lwe:lwe1961 1.4e-20 protein-tyrosine/serine phosphatase, putative K01104; COG: COG2365 Protein tyrosine/serine phosphatase; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.920
EDS72279.1
Clostripain family; KEGG: cpr:CPR_0833 5.5e-08 cloSI; clostripain K08587; COG: NOG17651 non supervised orthologous group.
   
  0.779
EDS71505.1
COG: COG5492 Bacterial surface proteins containing Ig-like domains.
       0.777
EDS73584.1
M6 family metalloprotease domain protein; KEGG: mxa:MXAN_3149 0.00034 peptidase, M6 (immune inhibitor A) family K01423; COG: COG3401 Fibronectin type 3 domain-containing protein.
   
 0.744
EDS73372.1
Peptidase, S8/S53 family; KEGG: bce:BC2316 4.0e-40 thermitase K08651; COG: COG1404 Subtilisin-like serine proteases; Psort location: Extracellular, score: 9.98.
   
 0.744
EDS73121.1
TraB family protein; COG: COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein); Psort location: CytoplasmicMembrane, score: 9.99.
    
   0.622
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.622
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
   
   0.600
thiF
Thiamine biosynthesis protein ThiF; KEGG: pha:PSHAa0485 1.6e-21 thiF; adenylyltransferase K03148; COG: COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
    
 0.546
EDS72472.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.502
Your Current Organism:
Anaerofustis stercorihominis
NCBI taxonomy Id: 445971
Other names: A. stercorihominis DSM 17244, Anaerofustis stercorihominis DSM 17244, Anaerofustis stercorihominis str. DSM 17244, Anaerofustis stercorihominis strain DSM 17244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.