STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_2732PFAM: periplasmic binding protein; KEGG: bpd:BURPS668_3152 putative iron chelate uptake ABC transporter, periplasmic solute-binding protein. (338 aa)    
Predicted Functional Partners:
Amir_2731
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I1413 iron compound ABC transporter, ATP-binding protein.
 
 0.932
Amir_2730
PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.919
Amir_4783
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcj:BCAL1346 putative Fe uptake system ATP- binding protein.
 
 0.853
Amir_3914
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_4566 ABC transporter related.
 
 0.846
Amir_4784
PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.827
Amir_2708
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_4222 ABC transporter related.
 
 0.823
Amir_2707
PFAM: transport system permease protein; ABC-3 protein; KEGG: rec:RHECIAT_PC0000463 putative iron ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.779
Amir_3911
PFAM: transport system permease protein; KEGG: pmy:Pmen_4564 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.743
Amir_3915
PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.686
Amir_2874
PFAM: transport system permease protein; KEGG: rce:RC1_3860 hemin transport system permease protein HmuU, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.535
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.