Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amir_0155 | Amir_3154 | TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: bur:Bcep18194_A5663 DNA translocase FtsK. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.448 |
Amir_3153 | Amir_3154 | PFAM: regulatory protein TetR; KEGG: bid:Bind_0033 TetR family transcriptional regulator. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.496 |
Amir_3154 | Amir_0155 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: bur:Bcep18194_A5663 DNA translocase FtsK. | 0.448 |
Amir_3154 | Amir_3153 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | PFAM: regulatory protein TetR; KEGG: bid:Bind_0033 TetR family transcriptional regulator. | 0.496 |
Amir_3154 | Amir_3537 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein. | 0.419 |
Amir_3154 | Amir_3927 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3710 arabinogalactan endo-1,4-beta- galactosidase; Belongs to the glycosyl hydrolase 43 family. | 0.408 |
Amir_3154 | Amir_4196 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | TIGRFAM: conserved repeat domain protein; PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein. | 0.446 |
Amir_3154 | Amir_4966 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | Alpha-N-arabinofuranosidase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin. | 0.473 |
Amir_3537 | Amir_3154 | PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.419 |
Amir_3537 | Amir_4966 | PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein. | Alpha-N-arabinofuranosidase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin. | 0.751 |
Amir_3927 | Amir_3154 | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3710 arabinogalactan endo-1,4-beta- galactosidase; Belongs to the glycosyl hydrolase 43 family. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.408 |
Amir_4196 | Amir_3154 | TIGRFAM: conserved repeat domain protein; PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.446 |
Amir_4966 | Amir_3154 | Alpha-N-arabinofuranosidase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin. | PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein. | 0.473 |
Amir_4966 | Amir_3537 | Alpha-N-arabinofuranosidase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin. | PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein. | 0.751 |