STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_3862Hypothetical protein. (362 aa)    
Predicted Functional Partners:
Amir_3864
PFAM: protein of unknown function DUF181; KEGG: bca:BCE_1377 hypothetical protein.
  
  
 0.904
Amir_3861
PFAM: Lantibiotic dehydratase domain protein; KEGG: scl:sce9070 hypothetical protein.
  
    0.846
Amir_3863
Hypothetical protein; KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase.
       0.837
Amir_3865
Hypothetical protein.
       0.834
Amir_3866
Hypothetical protein; KEGG: rsh:Rsph17029_3715 nitroreductase.
  
    0.811
Amir_0228
PFAM: Methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; Methyltransferase type 12; KEGG: hha:Hhal_0984 methyltransferase type 11.
  
    0.637
Amir_5271
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: sfu:Sfum_2834 methyltransferase type 12.
  
    0.637
Amir_3860
Hypothetical protein.
       0.584
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.