Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amir_2483 | Amir_2547 | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | KEGG: hypothetical protein. | 0.502 |
Amir_2483 | Amir_2931 | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | 0.444 |
Amir_2483 | Amir_3869 | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | KEGG: nar:Saro_1805 hypothetical protein. | 0.486 |
Amir_2547 | Amir_2483 | KEGG: hypothetical protein. | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | 0.502 |
Amir_2547 | Amir_2931 | KEGG: hypothetical protein. | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | 0.744 |
Amir_2547 | Amir_3869 | KEGG: hypothetical protein. | KEGG: nar:Saro_1805 hypothetical protein. | 0.454 |
Amir_2701 | Amir_3869 | Hypothetical protein. | KEGG: nar:Saro_1805 hypothetical protein. | 0.445 |
Amir_2931 | Amir_2483 | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | 0.444 |
Amir_2931 | Amir_2547 | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | KEGG: hypothetical protein. | 0.744 |
Amir_2931 | Amir_3869 | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | KEGG: nar:Saro_1805 hypothetical protein. | 0.426 |
Amir_2931 | Amir_4122 | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: azc:AZC_2089 hypothetical protein. | 0.619 |
Amir_2931 | Amir_4155 | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | PFAM: lipolytic protein G-D-S-L family; KEGG: bvi:Bcep1808_2033 allergen V5/TPX-1 family protein. | 0.454 |
Amir_3869 | Amir_2483 | KEGG: nar:Saro_1805 hypothetical protein. | Hypothetical protein; KEGG: similar to mucin 2; K10955 intestinal mucin- 2. | 0.486 |
Amir_3869 | Amir_2547 | KEGG: nar:Saro_1805 hypothetical protein. | KEGG: hypothetical protein. | 0.454 |
Amir_3869 | Amir_2701 | KEGG: nar:Saro_1805 hypothetical protein. | Hypothetical protein. | 0.445 |
Amir_3869 | Amir_2931 | KEGG: nar:Saro_1805 hypothetical protein. | PFAM: WD40 domain protein beta Propeller; KEGG: ade:Adeh_2230 hypothetical protein. | 0.426 |
Amir_3869 | Amir_3870 | KEGG: nar:Saro_1805 hypothetical protein. | Hypothetical protein. | 0.485 |
Amir_3869 | Amir_4122 | KEGG: nar:Saro_1805 hypothetical protein. | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: azc:AZC_2089 hypothetical protein. | 0.481 |
Amir_3869 | Amir_4155 | KEGG: nar:Saro_1805 hypothetical protein. | PFAM: lipolytic protein G-D-S-L family; KEGG: bvi:Bcep1808_2033 allergen V5/TPX-1 family protein. | 0.403 |
Amir_3869 | Amir_4601 | KEGG: nar:Saro_1805 hypothetical protein. | KEGG: hypothetical protein. | 0.400 |
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