node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amir_1095 | Amir_5223 | Amir_1095 | Amir_5223 | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.981 |
Amir_1095 | fmt | Amir_1095 | Amir_5224 | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.915 |
Amir_1095 | pheT | Amir_1095 | Amir_5464 | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. | 0.571 |
Amir_1095 | rlmN | Amir_1095 | Amir_5902 | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.447 |
Amir_5223 | Amir_1095 | Amir_5223 | Amir_1095 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | 0.981 |
Amir_5223 | fmt | Amir_5223 | Amir_5224 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.997 |
Amir_5223 | pheT | Amir_5223 | Amir_5464 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. | 0.964 |
Amir_5223 | rlmN | Amir_5223 | Amir_5902 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.979 |
Amir_5223 | rplJ | Amir_5223 | Amir_6637 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.935 |
Amir_5223 | rplM | Amir_5223 | Amir_6565 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.931 |
Amir_5223 | rplX | Amir_5223 | Amir_6603 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.930 |
Amir_5223 | rpoB | Amir_5223 | Amir_6627 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.924 |
Amir_5223 | rpsJ | Amir_5223 | Amir_6615 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.961 |
Amir_5223 | truB | Amir_5223 | Amir_5828 | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.964 |
fmt | Amir_1095 | Amir_5224 | Amir_1095 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | 0.915 |
fmt | Amir_5223 | Amir_5224 | Amir_5223 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
fmt | pheT | Amir_5224 | Amir_5464 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. | 0.705 |
fmt | rlmN | Amir_5224 | Amir_5902 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.447 |
fmt | truB | Amir_5224 | Amir_5828 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.427 |
pheT | Amir_1095 | Amir_5464 | Amir_1095 | KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. | PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase. | 0.571 |