STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU84283.1Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase family 53. (557 aa)    
Predicted Functional Partners:
ACU84287.1
Maltose-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein.
 
  
 0.849
ACU84286.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.822
ACU84285.1
ABC-type maltose transport systems, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
 0.801
ACU84284.1
Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase family 53.
 
    
0.794
ACU86685.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.630
ACU84221.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
  
     0.589
ACU84272.1
PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase.
 
  
 0.555
ACU84032.1
PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
  
    0.537
ACU85526.1
PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain.
 
  
 0.524
ACU85195.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain.
  
     0.507
Your Current Organism:
Brachybacterium faecium
NCBI taxonomy Id: 446465
Other names: B. faecium DSM 4810, Brachybacterium faecium ATCC 43885, Brachybacterium faecium DSM 4810, Brachybacterium faecium str. DSM 4810, Brachybacterium faecium strain DSM 4810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.