STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU84683.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
ACU84684.1
PFAM: BNR/Asp-box repeat; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
  
 
0.978
ACU84469.1
Arylsulfatase A family protein; PFAM: Sulfatase.
  
 
  0.915
ACU86583.1
Arylsulfatase A family protein; PFAM: Sulfatase.
    
  0.903
ACU84370.1
PFAM: Family 4 glycosyl hydrolase.
     
  0.900
ACU84604.1
Alpha-galactosidase; PFAM: Melibiase.
     
  0.900
ACU86718.1
Hypothetical protein.
     
  0.900
ACU84687.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
   
 0.839
ACU84689.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component; Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the binding-protein-dependent transport system permease family.
 
     0.778
nanE
Putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.746
ACU84691.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
   
 0.731
Your Current Organism:
Brachybacterium faecium
NCBI taxonomy Id: 446465
Other names: B. faecium DSM 4810, Brachybacterium faecium ATCC 43885, Brachybacterium faecium DSM 4810, Brachybacterium faecium str. DSM 4810, Brachybacterium faecium strain DSM 4810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.