STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_0242Cellulose-binding family II; KEGG: ami:Amir_3303 glycoside hydrolase family 62; PFAM: cellulose-binding family II; glycoside hydrolase family 62; SMART: cellulose-binding family II. (447 aa)    
Predicted Functional Partners:
Cfla_0246
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; cellulose- binding family II; KEGG: endo-1,4-beta-xylanase; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.791
Cfla_2848
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 62; Ricin B lectin; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; SMART: Ricin B lectin.
 
     0.772
Cfla_0383
KEGG: ami:Amir_3108 ricin B lectin; PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin.
     0.767
Cfla_1280
KEGG: ami:Amir_3302 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; Ricin B lectin; SMART: Ricin B lectin.
 
     0.763
Cfla_1313
Pectate lyase; KEGG: jde:Jden_0329 pectate lyase; PFAM: Pectate lyase; Ricin B lectin; SMART: Ricin B lectin.
 
     0.755
Cfla_0376
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Ricin B lectin; KEGG: ami:Amir_3214 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; Ricin B lectin.
 
   0.736
Cfla_0244
Glycoside hydrolase family 11; KEGG: cja:CJA_3763 endo-1,4-beta-xylanase, esterase, xyn11A; PFAM: glycoside hydrolase family 11; cellulose- binding family II; polysaccharide deacetylase; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.699
Cfla_2487
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; cellulose- binding family II; KEGG: ami:Amir_4732 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; cellulose- binding family II.
 
 
   0.662
Cfla_1515
Glycoside hydrolase family 9; KEGG: tfu:Tfu_1627 cellulose 1,4-beta- cellobiosidase; PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; Carbohydrate-binding CenC domain protein; Immunoglobulin I- set domain protein; SMART: Immunoglobulin subtype.
  
     0.658
Cfla_3031
PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; Carbohydrate-binding CenC domain protein; Immunoglobulin I- set domain protein; KEGG: tfu:Tfu_1627 cellulose 1,4-beta- cellobiosidase.
  
     0.652
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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