STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_0954PFAM: protein of unknown function DUF214; KEGG: sco:SCO2672 hypothetical protein. (1090 aa)    
Predicted Functional Partners:
Cfla_0953
PFAM: protein of unknown function DUF214; KEGG: bcv:Bcav_1557 protein of unknown function DUF214.
 
  
 0.954
Cfla_0956
KEGG: bcv:Bcav_1556 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   0.931
Cfla_0957
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
  
 0.922
Cfla_0955
KEGG: sgr:SGR_1662 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   0.874
Cfla_2827
Hypothetical protein; KEGG: hut:Huta_1312 peptidase S26B, signal peptidase.
  
     0.748
Cfla_1781
PFAM: sporulation and cell division protein SsgA; KEGG: sgr:SGR_5997 putative SsgB protein.
  
     0.716
Cfla_0171
PFAM: putative RNA methylase; KEGG: dra:DR_1669 hypothetical protein.
  
    0.673
Cfla_2224
KEGG: helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.666
Cfla_2852
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: scl:sce2341 hypothetical protein.
  
     0.657
Cfla_0958
PFAM: protein of unknown function DUF214; KEGG: sgr:SGR_4859 hypothetical protein.
 
    
0.647
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.