STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_3371Major facilitator superfamily MFS_1; InterPro IPR005829:IPR016196:IPR011701:IPR001411; KEGG: spe:Spro_4865 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YSZ0 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily. (513 aa)    
Predicted Functional Partners:
Ndas_3372
Monooxygenase FAD-binding protein; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: fra:Francci3_2111 monooxygenase, FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: C1YSY9 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
   
   0.523
Ndas_3370
InterPro IPR005509; KEGG: saq:Sare_3017 A-factor biosynthesis protein; PFAM: A-factor biosynthesis repeat-containing protein; SPTR: C1YSZ1 A-factor biosynthesis repeat protein; PFAM: A-factor biosynthesis repeat.
       0.455
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.