Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ndas_3421 | Ndas_3586 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | 0.619 |
Ndas_3585 | Ndas_3586 | Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterProIPR015865:IPR004821:IPR002606:IPR015864:IPR 014729; KEGG: tcu:Tcur_3326 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: C1YQZ2 Riboflavin kinase; FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain; Belongs to the ribF family. | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | 0.464 |
Ndas_3585 | Ndas_3587 | Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterProIPR015865:IPR004821:IPR002606:IPR015864:IPR 014729; KEGG: tcu:Tcur_3326 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: C1YQZ2 Riboflavin kinase; FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain; Belongs to the ribF family. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.477 |
Ndas_3586 | Ndas_3421 | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.619 |
Ndas_3586 | Ndas_3585 | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterProIPR015865:IPR004821:IPR002606:IPR015864:IPR 014729; KEGG: tcu:Tcur_3326 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: C1YQZ2 Riboflavin kinase; FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain; Belongs to the ribF family. | 0.464 |
Ndas_3586 | Ndas_3587 | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.996 |
Ndas_3586 | Ndas_3588 | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sro:Sros_9212 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YQY9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. | 0.511 |
Ndas_3586 | Ndas_5458 | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.899 |
Ndas_3587 | Ndas_3585 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterProIPR015865:IPR004821:IPR002606:IPR015864:IPR 014729; KEGG: tcu:Tcur_3326 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: C1YQZ2 Riboflavin kinase; FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain; Belongs to the ribF family. | 0.477 |
Ndas_3587 | Ndas_3586 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | 0.996 |
Ndas_3587 | Ndas_3588 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sro:Sros_9212 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YQY9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. | 0.511 |
Ndas_3587 | Ndas_5458 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.404 |
Ndas_3588 | Ndas_3586 | COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sro:Sros_9212 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YQY9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | 0.511 |
Ndas_3588 | Ndas_3587 | COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639:IPR000073; KEGG: sro:Sros_9212 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: C1YQY9 Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.511 |
Ndas_5458 | Ndas_3586 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | KEGG: rop:ROP_29420 hypothetical protein; SPTR: C1YQZ1 Putative uncharacterized protein. | 0.899 |
Ndas_5458 | Ndas_3587 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.404 |