STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_4758Acetylornithine transaminase; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: sen:SACE_3766 4-aminobutyrate transaminase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: C1YPA0 Aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (418 aa)    
Predicted Functional Partners:
Ndas_4757
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016162:IPR016161:IPR015590:IPR016160; KEGG: tfu:Tfu_2949 succinate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Succinate-semialdehyde dehydrogenase; SPTR: C1YPA1 Succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 0.967
Ndas_0263
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016160:IPR016162; KEGG: art:Arth_1894 betaine-aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1YHE4 4-hydroxybenzaldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family.
 
 0.925
Ndas_1337
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016160:IPR016162; KEGG: dra:DR_A0126 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: C1YRM3 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.925
Ndas_1930
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016161:IPR012394:IPR015590:IPR016160:IPR 016162; KEGG: sma:SAV_1187 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1YTD4 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 0.925
Ndas_1935
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162:IPR016160; KEGG: mva:Mvan_1643 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1YTC9 Delta-1-piperideine-6-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.925
Ndas_3248
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR016162:IPR016161; KEGG: stp:Strop_0827 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Betaine-aldehyde dehydrogenase; SPTR: C1YSQ1 Aldehyde dehydrogenase (Acceptor); PFAM: Aldehyde dehydrogenase family.
 
 0.925
Ndas_3410
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016161:IPR015590:IPR016162:IPR016160; KEGG: sro:Sros_7323 betaine-aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1YQC5 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 0.925
Ndas_3670
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR016161:IPR010061:IPR015590:IPR016162:IPR 016160; KEGG: tfu:Tfu_0687 methylmalonate-semialdehyde dehydrogenase [acylating]; PFAM: Aldehyde Dehydrogenase; SPTR: C1YU65 Methylmalonic acid semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase.
 
 0.925
Ndas_3669
COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR015424:IPR005814:IPR015421; KEGG: tfu:Tfu_0686 aminotransferase; PFAM: aminotransferase class-III; SPTR: C1YU66 Aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.920
Ndas_5171
COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: sco:SCO6411 hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: C1YI49 Predicted amidohydrolase; PFAM: Carbon-nitrogen hydrolase.
  
 
 0.920
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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