Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Snas_0105 | Snas_0600 | KEGG: predicted protein. | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | 0.450 |
Snas_0600 | Snas_0105 | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | KEGG: predicted protein. | 0.450 |
Snas_0600 | Snas_0601 | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | 0.450 |
Snas_0600 | Snas_1643 | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | 0.406 |
Snas_0600 | Snas_5245 | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | 0.408 |
Snas_0600 | Snas_5690 | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | Hypothetical protein; KEGG: psb:Psyr_4892 trypsin domain-containing protein. | 0.828 |
Snas_0601 | Snas_0600 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | 0.450 |
Snas_0601 | Snas_1643 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | 0.402 |
Snas_0601 | Snas_5245 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | 0.437 |
Snas_1643 | Snas_0600 | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | 0.406 |
Snas_1643 | Snas_0601 | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | 0.402 |
Snas_5245 | Snas_0600 | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | 0.408 |
Snas_5245 | Snas_0601 | PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 carboxypeptidase. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase. | 0.437 |
Snas_5690 | Snas_0600 | Hypothetical protein; KEGG: psb:Psyr_4892 trypsin domain-containing protein. | PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to transmembrane protease, serine 4. | 0.828 |