STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1293KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase. (485 aa)    
Predicted Functional Partners:
Snas_0949
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bam:Bamb_5116 exopolysaccharide transport protein family.
 
  
 0.992
Snas_3293
Hypothetical protein.
  
  
 0.965
Snas_0258
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rsh:Rsph17029_3698 WecB/TagA/CpsF family glycosyl transferase; Belongs to the glycosyltransferase 26 family.
   
 0.945
Snas_1484
KEGG: lch:Lcho_2341 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
   
 0.945
Snas_0948
Hypothetical protein; KEGG: pmy:Pmen_2781 anion transporter.
 
  
 0.937
Snas_6015
Mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; KEGG: hypothetical protein.
 
  
 0.918
Snas_0945
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: ara:Arad_4162 polysaccharide biosynthesis associated protein.
 
  
 0.902
Snas_1248
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; polysaccharide biosynthesis protein CapD; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_4428 dTDP-4-dehydrorhamnose reductase.
 
  
 0.893
Snas_6387
KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
0.888
Snas_0708
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.878
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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