STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2136Hypothetical protein. (147 aa)    
Predicted Functional Partners:
Snas_2137
KEGG: SL44-1; basic proline-rich protein.
       0.773
Snas_2138
Hypothetical protein.
       0.773
Snas_2139
Hypothetical protein.
       0.773
Snas_2140
Hypothetical protein.
       0.773
Snas_2141
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: cak:Caul_0312 DeoR family transcriptional regulator.
       0.526
Snas_2142
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: dat:HRM2_08650 PfkB1; Belongs to the carbohydrate kinase PfkB family.
       0.526
Snas_2143
TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; phosphotransferase system EIIC; KEGG: pin:Ping_0088 PTS system, mannitol-specific IIABC protein.
       0.424
Snas_2144
PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRB0363 putative mannitol-specific IIABC component, PTS system.
       0.424
Snas_2145
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pol:Bpro_1286 alcohol dehydrogenase GroES- like.
       0.424
Snas_2134
KEGG: bja:blr2082 hypothetical protein.
       0.423
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.